Skip to main content

Table 5 ResFinder results for resistance genes of Klebsiella pneumoniae

From: Antibiogram profile prediction of selected bacterial strains by in silico determination of acquired antimicrobial resistance genes from their whole-genome sequence

Species Strain Resistance genes Accession number Percentage identity (%) ResFinder predicted phenotype
K. pneumoniae 184468 OqXA EUB70913 99.23 CHL, NAL, CPR, TRI
dfrA1 X00926 100.00 TRI
dfrA12 AM040708 100.00 TRI
sul1 U12338 100.00 SMO
sul2 AY034138 100.00 SMO
OqXB EU370913 98.79 CHL, NAL, CPR, TRI
aac(3)-lld EU022314 99.88 APR, GEN
aadA1 JX185132 99.75 TOB, SPE, STP
armA AY220558 100.00 AMI, GEN, TOB, ISE
aac(6′)-lb-cr DQ303918 100.00 CPR
aadA2 JQ364967 100.00 SPE, STP
aph(6)-ld CP000971 100.00 STP
aph(3′)-VI KC170992 100.00 AMK
fosA ACWO01000079 99.29 FOS
mph(E) DQ839391 99.89 ERY
ere(A) FN396877 100.00 ERY
msr(E) FR151518 100.00 ERY, AZT
AAR-2 HQ141279 100.00 RFP
blaSHV-56 EU586041 99.54 AMX, AMP, AMXC, AMPC
blaSHV-89 DQ193536 99.54 AMX, AMP, CEP
blaSHV-76 AM176551 99.54 AMX, AMP, CEP
blaCTX-M-15 AY044436 100.00 AMX, AMP, CEF, CFT, CFZ
  1. CHL Chloramphenicol, NAL Nalidixic acid, CPR Ciprofloxacin, TMP Trimethoprim, SMO Sulfamethoxazole, APR Apramycin, GEN Gentamycin, TOB Tobramycin, SPE Spectinomycin, STP Streptomycin, AMK Amikacin, FOS Fosfomycin, ISE Isepamicin, ERY Erythromycin, AZT Azithromycin, RFP Rifampicin, AMX Amoxicillin, AMXC Amoxicillin + Clavulanic acid, AMP Ampicillin, AMPC Ampicillin + clavulanic acid, CEP Cephalotin, CEF Cefepime, CFT Cefotaxim, CFZ Ceftazidime