Table 1 Primers list for detection of the target viruses
Virus name | Primer’s name | Sequence (5' to 3') | base pairs( bp) | References |
|---|---|---|---|---|
Parainfluenza 1 | PIS1 + | CCG GTA ATT TCT CAT ACC TAT G | 317 | Bellau-Pujol et al. (2005) |
PIS1- | CCT TGG AGC GGA GTT GTT AAG | |||
Parainfluenza virus 2 | PIP2 + | AACAATCTGCTGCAGCATTT | 508 | |
PIP2 − | ATGTCAGACAATGGGCAAAT | |||
Parainfluenza virus 3 | Para3.1 | CTCGAGGTTGTCAGGATATAG | 189 | |
Para3.2 | CTTTGGGAGTTGAACACAGTT | |||
Human metapneumovirus | hmpv 1 | CCCTTTGTTTCAGGCCAA | 416 | Donofrio et al. (1992) |
hmpv 2 | GCAGCTTCAACAGTAGCTG | |||
Human rhinovirus | SRHI1 | GCATCIGGYARYTTCCACCACCANCC | 549 | Bellau-Pujol et al. (2005) |
SRHI2 | GGGACCAACTACTTTGGGTGTCCGTGT | |||
Human Respiratory syncytial virus | vrs P1 | GGAACAAGTTGTTGAGGTTTATGAATA TGC | 139 | Sultani et al. (2015) |
vrs P2 | TTCTGCTGTCAAGTCTAGTACACTGTAGT | |||
Influenza A | M226F | TTGTCCAAAATGCCCTAAATG | 335 | WHO (2002) |
M561R | GTTCCATAGCCTTTGCCGTAGTGC | |||
Influenza B | Bvf224 | ACATACCCTCGGCAAGAGTTTC | 284 | WHO (2011) |
Bvr507 | TGCTGTTTTGTTGTTGTCGTTTT | |||
BYf226 | ACACCTTCTGCGAAAGCTTCA | 388 | ||
BYr613 | CATAGAGGTTCTTCATTTGGGTTT |