Table 1 TCGA dataset's list of BC's VCAN mutational sites and types
Sample ID | Cancer type detailed | Protein change | Mutation type | No. of samples |
|---|---|---|---|---|
TCGA-BH-A0EE-01 | Breast invasive ductal carcinoma | M2799T | Missense_Mutation | 123 |
TCGA-C8-A12P-01 | Breast invasive ductal carcinoma | S1547C | Missense_Mutation | 141 |
TCGA-A2-A0YG-01 | Breast invasive ductal carcinoma | X348_splice | Splice_Site | 52 |
TCGA-A2-A0YG-01 | Breast invasive ductal carcinoma | D1008G | Missense_Mutation | 52 |
TCGA-AR-A1AV-01 | Breast invasive ductal carcinoma | E1272* | Nonsense_Mutation | 41 |
TCGA-D8-A27V-01 | Breast invasive lobular carcinoma | Q2845Sfs*8 | Frame_Shift_Del | 3080 |
TCGA-A2-A0YG-01 | Invasive breast carcinoma | X348_splice | Splice_Site | 50 |
TCGA-A2-A0YG-01 | Invasive breast carcinoma | D1008G | Missense_Mutation | 50 |
TCGA-AR-A1AV-01 | Invasive breast carcinoma | E1272* | Nonsense_Mutation | 38 |
TCGA-BH-A0EE-01 | Invasive breast carcinoma | M2799T | Missense_Mutation | 79 |
TCGA-C8-A12P-01 | Breast invasive ductal carcinoma | S1547C | Missense_Mutation | 123 |
TCGA-A2-A0YG-01 | Breast invasive ductal carcinoma | X348_splice | Splice_Site | 45 |
TCGA-A2-A0YG-01 | Breast invasive ductal carcinoma | D1008G | Missense_Mutation | 45 |
TCGA-AR-A1AV-01 | Breast invasive ductal carcinoma | E1272* | Nonsense_Mutation | 40 |
TCGA-BH-A0EE-01 | Breast invasive ductal carcinoma | M2799T | Missense_Mutation | 59 |
TCGA-C8-A12P-01 | Breast invasive ductal carcinoma | S1547C | Missense_Mutation | 109 |
TCGA-A2-A0YG-01 | Breast invasive ductal carcinoma | X348_splice | Splice_Site | 38 |
TCGA-A2-A0YG-01 | Breast invasive ductal carcinoma | D1008G | Missense_Mutation | 38 |
TCGA-AR-A1AV-01 | Breast invasive ductal carcinoma | E1272* | Nonsense_Mutation | 33 |
TCGA-GM-A2DB-01 | Breast invasive ductal carcinoma | Q2031H | Missense_Mutation | 125 |
TCGA-A8-A09Z-01 | Breast invasive lobular carcinoma | T1822I | Missense_Mutation | 1095 |
TCGA-A7-A0CE-01 | Breast invasive ductal carcinoma | N3147T | Missense_Mutation | 94 |
TCGA-A7-A3RF-01 | Breast invasive mixed mucinous carcinoma | P365H | Missense_Mutation | 32 |
TCGA-AC-A23H-01 | Breast invasive ductal carcinoma | S2826L | Missense_Mutation | 4259 |
TCGA-AR-A0TX-01 | Breast invasive ductal carcinoma | P1204A | Missense_Mutation | 276 |
TCGA-E2-A2P6-01 | Breast invasive lobular carcinoma | S3260F | Missense_Mutation | 104 |
TCGA-A8-A07L-01 | Breast invasive ductal carcinoma | M1368L | Missense_Mutation | 81 |
TCGA-E9-A1NF-01 | Breast invasive carcinoma (NOS) | E1739* | Nonsense_Mutation | 51 |
TCGA-AN-A046-01 | Breast invasive ductal carcinoma | K2228T | Missense_Mutation | 5400 |
TCGA-D8-A27T-01 | Breast invasive lobular carcinoma | V949L | Missense_Mutation | 21 |
TCGA-S3-AA14-01 | Breast invasive ductal carcinoma | E2310Q | Missense_Mutation | 16 |
TCGA-BH-A0EE-01 | Invasive breast carcinoma | M2799T | Missense_Mutation | 67 |
TCGA-C8-A12P-01 | Invasive breast carcinoma | S1547C | Missense_Mutation | 120 |
TCGA-A7-A0CE-01 | Invasive breast carcinoma | N3147T | Missense_Mutation | 77 |
TCGA-AR-A0TX-01 | Invasive breast carcinoma | P1204A | Missense_Mutation | 223 |
TCGA-A8-A07L-01 | Invasive breast carcinoma | M1368L | Missense_Mutation | 77 |
TCGA-GM-A2DB-01 | Breast invasive ductal carcinoma | Q2031H | Missense_Mutation | 103 |
TCGA-A8-A09Z-01 | Breast invasive lobular carcinoma | T1822I | Missense_Mutation | 1078 |
TCGA-A7-A0CE-01 | Breast invasive ductal carcinoma | N3147T | Missense_Mutation | 96 |
TCGA-A7-A3RF-01 | Invasive breast carcinoma | P365H | Missense_Mutation | 46 |
TCGA-AC-A23H-01 | Breast invasive ductal carcinoma | S2826L | Missense_Mutation | 3860 |
TCGA-E2-A105-01 | Breast invasive ductal carcinoma | P2900Afs*5 | Frame_Shift_Ins | 53 |
TCGA-AR-A0TX-01 | Invasive breast carcinoma | P1204A | Missense_Mutation | 258 |
TCGA-E2-A2P6-01 | Breast invasive lobular carcinoma | S3260F | Missense_Mutation | 106 |
TCGA-A8-A07L-01 | Breast mixed ductal and lobular carcinoma | M1368L | Missense_Mutation | 89 |
TCGA-E9-A1NF-01 | Breast invasive ductal carcinoma | E1739* | Nonsense_Mutation | 47 |
TCGA-GM-A2DB-01 | Breast invasive ductal carcinoma | Q2031H | Missense_Mutation | 81 |
TCGA-A8-A09Z-01 | Breast invasive lobular carcinoma | T1822I | Missense_Mutation | 990 |
TCGA-A7-A0CE-01 | Breast invasive ductal carcinoma | N3147T | Missense_Mutation | 90 |
TCGA-A7-A3RF-01 | Breast invasive mixed mucinous carcinoma | P365H | Missense_Mutation | 44 |
TCGA-AC-A23H-01 | Breast invasive ductal carcinoma | S2826L | Missense_Mutation | 3427 |
TCGA-E2-A105-01 | Breast invasive ductal carcinoma | P2900Afs*5 | Frame_Shift_Ins | 45 |
TCGA-A8-A0A6-01 | Breast invasive lobular carcinoma | H3333P | Missense_Mutation | 1995 |
TCGA-AR-A0TX-01 | Breast invasive ductal carcinoma | P1204A | Missense_Mutation | 216 |
TCGA-E2-A2P6-01 | Breast invasive lobular carcinoma | S3260F | Missense_Mutation | 93 |
TCGA-A8-A07L-01 | Breast invasive ductal carcinoma | M1368L | Missense_Mutation | 76 |
TCGA-E9-A1NF-01 | Breast mixed ductal and lobular carcinoma | E1739* | Nonsense_Mutation | 36 |
TCGA-AN-A0AT-01 | Breast invasive ductal carcinoma | T570S | Missense_Mutation | 117 |
TCGA-D8-A1JA-01 | Breast invasive ductal carcinoma | S1945F | Missense_Mutation | 785 |
TCGA-D8-A1JA-01 | Breast invasive ductal carcinoma | E2413K | Missense_Mutation | 785 |
TCGA-D8-A1XJ-01 | Breast invasive carcinoma (NOS) | G1144C | Missense_Mutation | 80 |
TCGA-AN-A0AT-01 | Invasive breast carcinoma | T570S | Missense_Mutation | 100 |
TCGA-B6-A0IE-01 | Invasive breast carcinoma | V1296Wfs*42 | Frame_Shift_Del | 26 |
TCGA-A8-A09C-01 | Breast mixed ductal and lobular carcinoma | T2115Hfs*44 | Frame_Shift_Del | 20 |
TCGA-AN-A0AT-01 | Breast invasive ductal carcinoma | T570S | Missense_Mutation | 98 |
TCGA-D8-A1JA-01 | Breast invasive ductal carcinoma | S1945F | Missense_Mutation | 770 |
TCGA-D8-A1JA-01 | Breast invasive ductal carcinoma | E2413K | Missense_Mutation | 770 |
TCGA-D8-A1XJ-01 | Invasive breast carcinoma | G1144C | Missense_Mutation | 70 |
TCGA-A8-A09C-01 | Breast invasive ductal carcinoma | T2115Hfs*44 | Frame_Shift_Del | 17 |
TCGA-AN-A0AT-01 | Breast invasive ductal carcinoma | T570S | Missense_Mutation | 87 |
TCGA-D8-A1JA-01 | Breast invasive ductal carcinoma | S1945F | Missense_Mutation | 682 |
TCGA-D8-A1JA-01 | Breast invasive ductal carcinoma | E2413K | Missense_Mutation | 682 |
TCGA-D8-A1XJ-01 | Breast invasive ductal carcinoma | G1144C | Missense_Mutation | 56 |
TCGA-A8-A07R-01 | Breast invasive ductal carcinoma | D1177H | Missense_Mutation | 372 |
TCGA-A8-A07R-01 | Breast invasive ductal carcinoma | D1177H | Missense_Mutation | 357 |