Skip to main content

Table 1 Study characteristics of the included publications

From: Antibiotics profile map of clinical A. baumannii strains isolated from health institutions in Turkey: a database search study and analysis of publications from 2011 to 2022

No.

Institution

Date of study and publication

A. baumannii isolates number

Types of samples or infection

Ward of isolation

Notes

References

1

Tertiary care educational hospital, Izmir

Between January 2009 and March 2011/2011

72

Deep tracheal aspirate

 

Overall mortality was 55.5%

Tasbakan et al. 2011)

2

Gazi University Hospital, Ankara,

From 2007 – 2010/2011

39

Pneumonia, primary bloodstream infections, catheter related, bloodstream infections, urinary tract infections, and skin–soft tissue infection

Intensive care unit (ICU)

Mortality rate 83%

Turkoglu et al. 2011)

3

Department of Pediatrics Intensive Care Unit of Ankara University Medical School, Turkey

Between January 2008 and December 2008/2011

15

Ventilator-associated pneumonia, Catheter-related infection and Meningitis

ICU

Mortality rate 33.3%

Ozdemir et al. 2011)

4

İzmir Atatürk Training and Research Hospital, Izmir

2011/2012

161

blood cultures

ICU

 

Uzun et al. 2012)

5

Farabi Hospital, a university hospital in Trabzon, Turkey

Between January 2007 and September 2010/2012

30

Cerebrospinal fluid (CSF)

Neurosurgical intensive care unit (NSICU)

Mortality in the clinically significant group 85.7%, in the clinically insignificant group 33.3%

Bayramoglu et al. 2012)

6

Süleyman Demirel University Hospital in Isparta, Turkey

Between February 2009 and February 2011/2012

34

Tracheal aspirate, blood and wound

ICUs

 

Aye et al. 2012)

7

Diyarbakir Children’s Hospital’s (Diyarbakir, Turkey)

2006 and 2007/2012

64

Blood sample and tracheal aspiration

Neonatal Intensive Care Unit (NICU)

Neonates’ mortality with sepsis (82.8%)

Hosoglu et al. 2012)

8

Nine different state hospitals in Turkey

Between 2011 and 2012/2013

281

All strains were isolated from different hospitals

  

Çıçek et al. 2013)

9

82.Yil Rize State Hospital

June 2011/2013

6

Wound, urine and sputum samples

ICU

All the patients died as a result of A. baumannii sepsis

Cicek et al. 2013)

10

Dokuz Eylul Hospital, Izmir Turkey

2012 and 2013/2013

21

Blood, peritoneal fluid, tracheal aspirate and central venous catheter ( CVC)

ICU 90.74%

 

Sarı et al. 2013)

11

Van Regional Training and Research Hospital, Van, Turkey

Between 2007 and 2011/2013

377

Tracheal aspirate, blood, wound swab, urine, sputum, cerebrospinal fluid, aspiration fluid, catheter tip, ear, paracentesis fluid, throat swab, and abscess

Surgical services, chest diseases service, pediatric service and internal ward

 

Bayram et al. 2015)

12

Ãœmraniye Training and Research Hospital, Istanbul

November 2010 and December 2011/2013

172

Tracheal aspirate, wounds, blood, and, urine

ICU

 

Dede et al. 2013)

13

Suleyman Demirel University

Between June 2009 and February 2011/2013

20

Tracheal aspirate and blood sample

ICU

 

Cetin et al. 2013)

14

Kayseri Training and Research Hospital

Between March 2011 and November 2012/2013

161

Tracheal aspirate, blood, urine, sputum, and wound

  

Gozutok et al. 2013)

15

The Erciyes University Hospital in central Anatolia, the Asian part of Turkey

Between February 2007 and March 2008/2013

98

Blood samples

  

Metan et al. 2013 Jun)

16

Sakarya University Training and Research Hospital,

2012/2013

20

Urine, sputum, and pus

From hospitalized patient

 

Ertugrul et al. 2013)

17

medical centers in 13 provinces (Afyonkarahisar, Ankara, Bolu, Elazig, Erzurum, Isparta, Istanbul, Kahramanmaras, Konya, Sakarya, Van

Between 2008 and 2011/2013

834

Tracheal aspirate, blood, urine and wound samples

ICU, neurology, general surgery and internal medicine departments

 

Çi̇ftc et al. (2013

18

Faculty of Medicine, Dicle University, Diyarbakir, Turkey

Between 2007 and 2010/2013

127

Mid-stream urine samples, blood samples and wound swabs

(42%) from the intensive care unit (58%) from the non-intensive care unit

 

Deveci et al. 2013)

19

Ahi Evran University Research and Training Hospital, Kırsehir

November 2008 to June 2012/2013

37

Urine samples

From inpatients and outpatients

 

Demir and Buyukguclu 2013)

20

Van Training and Research Hospital Van, Turkey

January 2009 to December 2011/2013

59

Wound specimens and wound swaps

The burn unit

 

Bayram et al. 2013)

21

Ankara Training and Research Hospital, Ankara, Turkey

Between January 2010 and March 2012/2014

30

Tracheal aspirates, blood, catheter, wound infection, urine samples and peritoneal fluid samples

ICU

 

Altun et al. (2014)

22

Ege University Medical School Hospital, Izmir, Turkey

From 1 March to 1 September 2012/2014

60

Blood samples

ICUs (respiratory and anesthesiology)

Fifteen patients died within the first 48 h (mortality rate 100%). The overall crude mortality rate for the 45 patients was 55.6%

Zeka et al. 2014)

23

9 university hospitals and 2 state hospitals in Turkey

Between 2008 and 2011/2014

763

Various clinical isolates

  

AÅŸik et al. 2014)

24

Bezmialem University Hospital, Istanbul. Turkey

November 2011 and July 2012/2014

101

Tracheal aspirates, sputum, wound, blood, catheter, abdominal specimen, cerebrospinal fluid, pleural fluid, and urine

Intensive care unit, pediatric intensive care unit, internal units (nephrology, pulmonology, etc.) and surgical clinics,

 

Cicek et al. 2014)

25

Medipol University, Istanbul, University, (Istanbul) and Canakkale Onsekiz Mart University, Canakkale, Turkey

2010–2011/2014

60

Blood specimens

Bacteremia patients admitted to the various hospitals in Turkey

 

Bozkurt-Guzel et al. 2014)

26

Atatürk University Faculty of Medicine Research Hospital

Between October 2011 and May 2013/2014

82

Blood samples

  

Gultekin et al. 2014)

27

Recep Tayyip Erdogan University Hospital (RTEUH) east Black Sea region of Turkey

Between January 2011 and May 2012/2014

109

Bronchoalveolar lavage, urine, blood, catheter, gaita, vagina, wound and tracheal aspirate

Four ICUs (surgery, medical, cardiovascular surgery, coronary care unit)

AB isolates were 64 clinical materials 42 samples from environmental samples, and 3 from workers hands

Ertürk et al. 2014)

28

Kocaeli University Medical Faculty Infection and Clinical Microbiology Laboratory

Between January 1, 2008, and December 31, 2012/2014

385

Respiratory tract, blood, soft tissue, urine samples, catheter, Sterile body fluid and drain

ICUs

 

Sargin Altunok and Koc 2014)

29

Istanbul University Cerrahpasa Medical School hospital

Between January 2012 and November 2013/2014

36

Blood samples

ICU and various departments of the hospital

 

Cakirlar and Gonullu 2014)

30

Erciyes University Hospital

Between January and December 2011/2014

87

Endotracheal aspirates and bronchial lavage samples

ICUs

The overall mortality rate 60.7%

Kalin et al. 2014)

31

Tepecik Education and Research Hospital, Izmir, Turkey

Between January 2011 and October 2012/2014

98

Wound, respiratory specimen, urine, blood and CSF

99.2% from ICU

 

Ece et al. 2014)

32

Ataturk Training and Research Hospital

Between 2008 and 2011/2014

252

Ventilator-associated pneumonia, primary bacteremia catheter related, bloodstream infection, Soft tissue infection Pneumonia, Urinary tract infection, Meningitis

ICUs

 

Güven et al. 2014)

33

Ankara Numune Training and Research Hospital, Turkey

01 January 2012–28 December 2012/2014

47

Blood samples

ICUs,

 

Karagöz et al. 2014)

34

Ibni Sina Hospital Central Bacteriology Laboratory, Ankara University School of Medicine, Turkey

From April 2010 to December 2011/2014

201

Tracheal aspirate, blood and abscess material

Reanimation services are the most frequently isolated A. baumannii strains. emergency services including neurosurgery general surgery clinics

 

Keskin et al. 2014)

35

Meram Medical Faculty Hospital

Between June 2011 and December 2013/2014

1462

Bronchial lavage, blood, wound, tracheal aspirate, throat swab, urine, sputum, catheter tip, cerebrospinal fluid, thoracentesis material, pleural fluid and peritoneal fluid

Intensive care units (66.2%) and other clinics (30.3%)

 

DoÄŸan et al. (2014)

36

Erciyes University Hospital

January 2012 and July 2013/2014

29

Blood, catheter tip, bronchoalveolar lavage fluid, endotracheal aspirate, Endotracheal aspirate and sputum

ICU

Mortality rate 82.1%

Metan et al. 2014)

37

Baskent University Adana Research and Practice Center, Turkey

Between 16 February 2012 and 31 December 2014/2014

135

Blood samples

  

Çolakoğlu et al. 2014)

38

Sakarya University Training and Research Hospital Microbiology Laboratory (Turkey

/2015

32

Various clinics samples

  

Atasoy et al. 2015)

39

Izmir University School of Medicine Hospital

Between January 1, 2013, and June 30, 2013/2015

33

Wound, blood, and tracheal secretion specimens

ICU

 

Ece et al. 2015

40

Sabuncuoglu Serefeddin Education and Research Hospital

Between January 2012 and June 2015/2015

163

Respiratory tract, blood, surgical scars and urinary samples

Intensive Care Units 85.2%).Surgery clinics And Other Clinics

 

Guckan et al. (2017)

41

Dicle University, Medicine Faculty Hospital

/2015

80

Sputum, blood samples, wound swabs, catheter swabs, urine samples and drain fluid

  

Özcan et al. (2015)

Di̇rekel et al. (2015)

42

Giresun Prof. Dr. Atilla ilhan Ozdemir State Hospital

Between January 2012 and June 2014/2015

531

Tracheal aspirate, urine, blood, wounds, sputum and catheter

ICUs( neurological Intensive Care Unit, Surgical Intensive Care Unit and Coronary Intensive Care Unit)

  

43

Ankara Training and Research Hospital

Between June 2011 and June 2012/2015

30

Blood samples

Different clinics

 

Temocin et al. 2015)

44

Medeniyet University Goztepe Training and Research Hospital, Istanbul, Turkey

Between June 2011 and July 2012/2016

54

Blood specimens

Burn intensive care unit, surgical intensive care unit, department of internal medicine, department of infectious diseases, the department of general surgery

 

Ak et al. 2016)

45

Ankara Training and Research Hospital

Between June 2011 and June 2012/2016

44

Tracheal aspirates, urine, catheters, skin mucosa, blood, cerebrospinal fluid, and pleural fluid samples

Mainly from ICU

 

Altun et al. 2016)

46

Ataturk Training and Research Hospital, Izmir, Turkey

Between 2009 and 2013/2016

88

Blood samples

(ICUs)

Overall mortality was 63.6%

Nemli and Demirdal (2016)

47

12 hospitals located at different provinces of Turkey (Bolu (n = 67), Tokat (n = 47), Trabzon (n = 25), Ordu (n = 27), Diyarbakır (n = 47), Niğde (n = 31), Kayseri (n = 36), Ankara (n = 41), Kirikkale (n = 26),Kahramanmaraş (n = 25), Mersin (n = 40), Istanbul (n = 107

Between 2011 and 2012/2016

519

   

BeriÅŸ et al. 2016)

48

Gebze Fatih state hospital, Kocaeli

Between January 2011 and June 2011/2016

100

Tracheal aspirate samples, sputum, blood, urine, wound, exudate, discharge, and various clinical samples (abscess, surgical material and cerebrospinal fluid)

intensive care unit, Chest diseases and Internal medicine

 

Gür Vural and Durupinar (2016)

49

Mersin University Medical School Hospital

Between May 2012 and January 2013/2016

79

Respiratory tract samples, wound, blood, catheters, tissue, urine and abscess

General Surgery, Reanimation and anesthesiology

 

Direkel et al. 2016)

50

Near East University (NEU) Hospital, North Cyprus

Between 01 August 2010 and 31 December 2014/2016

61

Wound material, sputum, deep tracheal aspirate, Urine, blood and catheter

Specimens sent by various departments

 

Ruh et al. 2016)

51

Ordu University Faculty of Medicine, Department of Medical Microbiology, Ordu, Turkey

Between January 2013 and August 2014/2016

50

Tracheal aspirates, blood, urine and wound samples

  

Çetinkol et al. 2016)

52

Adana Kadirli State Hospital

March 2014/2016

7

Three tracheal aspirates and four environmental samples (ventilator surface)

ICU

 

Guven Gokmen et al. 2016)

53

Balikesir Ataturk State Hospital Balikesir, Turkey

Between January 2010 and May 2016/2016

707

Respiratory tract, blood, wounds, urine, and another

ICU (83.4%) others from internal units and surgical units

 

Åžafak et al. (2016)

54

Ankara Numune Research and Training Hospital in Ankara, Turkey

Between June 2012 and August 2012/2016

18

Endotracheal aspirates

ICU

 

YavaÅŸ et al. 2016)

55

ÅžiÅŸli Hamidiye Etfal Training and Research Hospital

Between March 2014 and March 2015/2017

131

Blood, urine, respiratory tract samples, sterile body fluid, skin-soft tissue and Catheter

Pediatric and adult ICUs

 

Barış et al. 2017)

56

İzmir Katip Çelebi University Atatürk Training and Research Hospital

Between 2009 and 2010/2017

84

   

Büyük et al. 2017)

57

Erciyes University Hospital Turkey

Between March 2014 and May 2015/2017

52

Endotracheal aspirate

(ICUs)

 

Alp et al. 2017)

58

Giresun Prof. Dr. A. Ilhan Ozdemir State Hospital in Turkey

Between 2013 June and 2014 September/2017

135

Tracheal aspirates, sputum, bronchoalveolar lavage, blood, urine, wound, catheter tips, cerebrospinal fluid, pleural fluid, abscess and tissue culture

intensive care unit, internal units (cardiology, pulmonology, etc.) and surgery clinics

 

Uzunoglu and Direkel 2017)

59

Mugla Sitki Kocman University Research Hospital, Mugla, Turkey

January to December 2015/2017

50

Tracheal aspirate blood, wound, mucus, urine, throat cultures, catheter, abscess and nose cultures

ICU

 

Ceyhan-Guüvensen et al. 2017)

60

Bursa Yuksek Ihtisas Education and Research Hospital Turkey

2014 and 2016/2017

89 (2014) 73 (2016)

Blood, cerebrospinal fluid, urine, wound, tissue and tracheal aspirate

ICU

 

Karadag Gecgel and Demir (2017)

61

Sultan Abdulhamid Han Training and Research hospital, Istanbul, Turkey

Between 03 January 2015 and 10 January 2015/2018

8

Blood, respiratory catheter, bronchoalveolar lavage and respiratory secretion samples

Anesthesiology and Reanimation ICU

 

Atik et al. 2018)

62

20 tertiary care centers from different geographic regions of Turkey

2014 and 2015/2018

437

Bloodstream infections

  

Aydın et al. 2018)

63

Bezmialem Vakif University Hospital Istanbul, Turkey

From January 2012 to November 2015/2018

350

Bloodstream infections pneumonias and urinary tract infections,

Five ICUs (anesthesia and reanimation I and II, respiratory, and neurology units), surgical unit (cardiovascular surgery) medical unit (coronary ICU)

 

Durdu et al. 2018)

64

Kahramanmaraş Sütçü İmam University (KSU) Medical Faculty Hospital

Between 01.01.2012 and 31.12.2017/2019

717

Tracheal aspirate, sputum, blood, wound, urine and bronchoalveolar lavage (BAL) fluid

63.1% in surgical branches ICUs and 69.1% in internal branches ICUs

 

Åžahin et al. 2019)

65

Karabuk University Training and Research Hospital

From 2014 to 2015/2019

69

Endotracheal aspirates, blood, wounds, urine sputum and bronchoalveolar lavage fluid

(78.3%) in the surgical intensive care unit and reanimation intensive care unit, (21.7%) in the wards

 

Asgin et al. 2019)

66

10 different medical centers located in five different geographical regions (Aegean, Central and Eastern Anatolia, Marmara, Mediterranean) of Turkey

2012/2019

176

Blood, cerebrospinal fluid (CSF), bronchoalveolar lavage fluid (BAL), pleural fluid, tissue and catheter

ICUs of medical centers, medicine, surgery, burns units and emergency medicine service

Mortality 58.5%

Boral et al. 2019)

67

Hacettepe University Hospital

Between June 2016 and January 2017/2019

200

Bronchoalveolar lavage, deep tracheal aspirate, sputum blood, abscess, urine, CSF, bile, pericardial, peritoneal, pleural fluids, and catheter

  

Çağlan et al. 2019)

68

Hacettepe University Medical Faculty Hospital

Between December 2017 and December 2018/2019

91

Blood samples

ICU 65.93%

 

Gür and Hazırolan 2019)

69

Duzce University Hospital in Turkey

Between January 2014 and July 2015/2019

96

Tracheal aspirates, sputum, bronchoalveolar lavage, wound, urine, blood, and cerebrospinal fluid

Intensive care unit, internal units (cardiology, pulmonology, etc.) surgery clinics

 

Say Coskun et al. 2019)

70

Sultan Abdülhamid Han Training Hospital

January 2012 and December 2014/2019

100

Deep tracheal aspirate, bronchoalveolar lavage fluid, blood, tissue, sterile body fluid-pleural effusion, peritoneal fluid and urine

Anesthesiology and Reanimation Intensive Care Unit (ARIC), Internal Medicine and Intensive Care Unit (IMICU)

 

Atik et al. 2019)

71

Giresun University A. İlhan Özdemir Training and Research Hospital

Between January 2015 and 2018/2019

609

Tracheal aspirate, sputum, leather-soft tissue material, urine and blood

General ICU, Anesthesia ICU, Neurology ICU, Internal ICU, Surgical ICU and Coronary ICU

 

Uğur and Genç 2019)

72

Okmeydani Training and Research Hospital

January 2014 and December 2018/2020

655

Respiratory tract, skin and soft tissue samples, cerebrospinal fluid, catheter samples, blood, Urine and sterile body fluids

ICU 47.5%

 

Arabaci and Karabulut 2020)

73

Yıldırım Beyazıt Üniversitesi Tıp Fakültesi Tıbbi Mikrobiyoloji AD, Ankara

January 2012 and June 2014/2020

112

Blood samples

ICUs

 

Gozalan et al. 2020)

74

Recep Tayyip ErdoÄŸan Training and Research Hospital (RTETRH)

March 2014 and March 2015/2020

86

Tracheal aspirates, bronchoalveolar lavage, sputum, bronchial washing fluid/bronchial brushing, transbronchial biopsy, pleural fluid and lung aspirates/abscess

ICUs

 

KostakoÄŸlu et al. 2020)

75

Clinics of Afyonkarahisar Health Sciences University

Between January 2015 and December 2018/2020

1265

Tracheal aspirate, sputum and blood samples

Intensive care units (70.4%) as well as other clinics (29.6%)

 

ÅžimÅŸek and Demir 2020)

76

Tertiary Research Hospital Black Sea region of Turkey Recep Tayyip Erdogan University, Rize, Turkey

Between June 2014 and February 2015/2020

70

Endotracheal aspirates, bronchoalveolar lavage, sputum, bronchial washing fluid or brushing, lung aspirates, abscesses, pleural fluid (three isolates were from ambient cultures from the isolation chamber of IMICU)

ICUs (SICU, MICU, ARICU), pulmonary diseases department, and infectious diseases department

Mortality 59.1%

Ozyurt et al. 2020)

77

Istanbul Medeniyet University Faculty of Medicine, Istanbul

Between January 1, 2015, and December 31, 2018/2020

1148

Blood, tracheal aspirate, urine, Aspirate, Wound, Sputum, Tissue biopsy, catheter,

  

Ozekinci et al. 2020)

78

Hacettepe University Central Laboratory

Between September 2017 and November 2019/2020

44

Bloodstream infections

  

Özkul and Hazırolan 2020)

79

Marmara University Hospital

Between 2015 and 2016/2020

29

   

Yilmaz et al. 2020)

80

Samsun Training and Research Hospital

Between January 2018 and December 2018/2020

68

Tracheal aspirate, wound, blood, sputum, urine and catheter samples

ICUs( burn intensive care, and oncological intensive care)

 

Gorgun et al. 2020)

81

Hasan Kalyoncu University Health Sciences Faculty, Gaziantep, Turkey

Between January 2018 and July 2019/2020

28

Blood, tracheal aspirate, urine samples, wound and cerebrospinal fluid (CSF)

ICUs(pediatric intensive care and neurology intensive care)

 

Tasdogan 2020)

82

Ordu State Hospital

Between 1 May 2020 and 2 July 2021/2021

31

Blood and tracheal aspirate samples

ICUs

mortality 57.83%

DoÄŸan and Gezer 2021)

83

Harran University Faculty of Medicine Hospital, Sanliurfa, Turkey

Between January 2017 and December 2019/2021

92

Blood samples

Inpatients at various clinics

 

Albayrak et al. 2021)

84

Ankara Atatürk Research and Training Hospital

Between 2014 and 2018/2021

8

Cerebrospinal fluid (CSF)

Neurosurgical intensive care unit (ICU), anesthesiology and reanimation ICU

 

Ayhan et al. 2021)

85

Rize Training and Research Hospital Intensive Care Unit Turkey

/2021

41

Tracheal aspirate, blood, urine and bronchoalveolar lavage

ICU

 

Saral et al. 2021)

86

University Children’s Hospital in Adiyaman, Turkey

Between January 2015 and January 2017/2021

46

Respiratory tract specimens, blood, pus, wounds and urine

ICU

 

Konca et al. 2021)

87

17 centers from 11 cities (Ankara, Adana, Balikesir, Gaziantep, Ä°stanbul, Izmir, Kayseri, Kocaeli, Manisa, Tekirdag, Zonguldak

From January 2016 to January 2019/2021

7533

Sputum, tracheal aspirate, bronchoalveolar lavage (BAL), bronchial washing/brushing and pleural fluid samples

  

Uskudar Guclu et al. (2021)

88

Mardin Training and research hospital

Between August 2006 and July 2010/2022

84

Blood, deep tracheal aspiration material, urine, wound, catheter

Respiratory intensive care unit

Mortality 87.1%

Çil et al. 2022)

89

Near East University (NEU) Hospital

Between January 2016 and December 2020/2022

33

Blood samples

Intensive Care Cardiology, chest diseases allergy and oncology

 

Güler et al. 2022)

90

Bafra State Hospital

Between January 2019 and December 2020/2022

74

Endotracheal aspirate (ETA)

ICU

 

Seda GÃœDÃœL HAVUZ 2022)

91

Elazığ Fethi Sekin State of Hospital, Recep Tayyip Erdoğan University and Fırat University

Between March 2019 and March 2021/2022

350

Sputum and deep tracheal aspiration (DTA)

ICU, Service and clinical units

 

Åženol et al. 2022)