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Table 2 Protein target structure, native ligand and active site amino acids

From: Essential oil from Cymbopogon citratus exhibits “anti-aspergillosis” potential: in-silico molecular docking and in vitro studies

Pdb id

Macromolecule

Native ligand

Interacting active site residues

Cavity

Area

Volume

4gf8

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TYR 454, ASP458, THR456,457, PRO48, 131, LYS459, ASN129, PHE40, SER128, TYR 132,454, TRP306, ALA457, GLN412

939.053

3369.091

5u6m

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ASN333, 332, LEU 331, PHE354, LYS415, 419, 334, ARG422, SER332, ALA335,VAL 356

1087.766

1096.959

1jxa

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ALA400, VAL399, GLY 505, HIS 504, TYR 304, GLN348, SER 303, LEU 346, LYS 603, GLU 396, GLN 348, CYS300, THR352, 302, GLU 396

1648.961

1198.342