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Table 3 Types of interactions in the Reference ligand (X6K)-4JT6 (mTOR) receptor complex

From: A theoretical insight in interactions of some chemical compounds as mTOR inhibitors

Distance

Types

From

From Chemistry

To

To Chemistry

Angle DHA

Angle HAY

1.766

Conventional Hydrogen Bond

B:VAL2240:HN

H-Donor

:RES1:O2

H-Acceptor

151.351

123.36

2.275

Conventional Hydrogen Bond

:RES1:H01

H-Donor

B:ASP2195:OD2

H-Acceptor

153.335

136.905

2.653

Carbon Hydrogen Bond

B:TRP2239:HA

H-Donor

:RES1:O2

H-Acceptor

138.065

105.269

2.762

Carbon Hydrogen Bond

:RES1:H101

H-Donor

B:GLY2238:O

H-Acceptor

112.187

161.952

2.775

Carbon Hydrogen Bond

:RES1:H111

H-Donor

B:VAL2240:O

H-Acceptor

146.604

124.89

2.254

Carbon Hydrogen Bond

:RES1:H121

H-Donor

:RES1:O1

H-Acceptor

116.681

96.896

2.715

Carbon Hydrogen Bond

:RES1:H91

H-Donor

B:GLY2238:O

H-Acceptor

125.859

133.916

5.115

Alkyl

B:VAL2240

Alkyl

:RES1

Alkyl

  

5.185

Alkyl

B:MET2345

Alkyl

:RES1

Alkyl

  

5.368

Alkyl

B:ILE2356

Alkyl

:RES1

Alkyl

  

5.496

Pi–Alkyl

B:TYR2225

Pi-Orbitals

:RES1

Alkyl

  

4.846

Pi–Alkyl

B:TRP2239

Pi-Orbitals

:RES1

Alkyl

  

5.281

Pi–Alkyl

B:TRP2239

Pi-Orbitals

:RES1

Alkyl

  

4.880

Pi–Alkyl

:RES1

Pi-Orbitals

B:ILE2163

Alkyl

  

4.864

Pi–Alkyl

:RES1

Pi-Orbitals

B:LEU2185

Alkyl

  

4.640

Pi–Alkyl

:RES1

Pi-Orbitals

B:LEU2185

Alkyl

  

4.398

Pi–Alkyl

:RES1

Pi-Orbitals

B:ILE2356

Alkyl

  

5.402

Pi–Alkyl

:RES1

Pi-Orbitals

B:LYS2187

Alkyl

  

4.650

Pi–Alkyl

:RES1

Pi-Orbitals

B:ILE2237

Alkyl

  

4.956

Pi–Alkyl

:RES1

Pi-Orbitals

B:ILE2356

Alkyl