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Table 2 Blast results of Egyptian H. pylori 16s rRNA partial sequence with Gene bank nucleotide consensus sequences

From: A variety of Helicobacter pylori strains colonize the stomach of non-bleeding Egyptian patients with upper gastrointestinal disorders

Endoscopic diagnosis

Strain

No. of patients

Identity

accession number

Non-ulcerative lesions (no.11)

H. pylori SouthAfrica20

5

97–99%

CP006691.1

H. pylori SouthAfrica7

1

97%

CP002336.1

H. pylori oki828 (Japan)

2

99%

CP006826.1

H. pylori oki898 (Japan)

1

96%

CP006826.1

H. pylori oki128 (Japan)

1

99%

CP006822.1

H. pylori strain BM012B (USA)

1

97%

CP007605.1

Ulcerative lesions (no. 15)

H. pylori SouthAfrica20

2

96%

CP006691.1

H. pylori SouthAfrica7

1

97%

CP002336.1

H. pylori oki828 (Japan)

5

98–99%

CP006826.1

H. pylori oki128 (Japan)

1

99%

CP006822.1

H. pylori MKM6 (Japan)

1

98–99%

AP017362

H. pylori strain BM012B (USA)

2

97–98%

CP007605.1

H. pylori strain BM013B (USA)

1

99%

CP007606.1

H. pylori J166 (USA)

1

88%

CP007603.1

H. pylori J99 (USA)

1

99%

CP011330.1

Neoplastic lesions (no. 7)

H. pylori SouthAfrica20

2

96%

CP006691.1

H. pylori Gambia94/24 (Gambia)

3

88–93%

CP002332.1

H. pylori NY40 DNA (Japan)

1

94%

CP002332.

H.pylori USU-102 (USA)

1

98%

EU544226